aboutsummaryrefslogtreecommitdiff
path: root/doc/html/classisis__base.html
blob: f7a33629a53e512eb2ee68e712955d6dfe450fde (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
<!-- This comment will put IE 6, 7 and 8 in quirks mode -->
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<title>IsisReader: isis_base Class Reference</title>
<link href="tabs.css" rel="stylesheet" type="text/css"/>
<link href="search/search.css" rel="stylesheet" type="text/css"/>
<script type="text/javaScript" src="search/search.js"></script>
<link href="doxygen.css" rel="stylesheet" type="text/css"/>
</head>
<body onload='searchBox.OnSelectItem(0);'>
<!-- Generated by Doxygen 1.6.1 -->
<script type="text/javascript"><!--
var searchBox = new SearchBox("searchBox", "search",false,'Search');
--></script>
<div class="navigation" id="top">
  <div class="tabs">
    <ul>
      <li><a href="index.html"><span>Main&nbsp;Page</span></a></li>
      <li><a href="namespaces.html"><span>Namespaces</span></a></li>
      <li class="current"><a href="annotated.html"><span>Classes</span></a></li>
      <li><a href="files.html"><span>Files</span></a></li>
      <li>
        <div id="MSearchBox" class="MSearchBoxInactive">
        <img id="MSearchSelect" src="search/search.png"
             onmouseover="return searchBox.OnSearchSelectShow()"
             onmouseout="return searchBox.OnSearchSelectHide()"
             alt=""/>
        <input type="text" id="MSearchField" value="Search" accesskey="S"
             onfocus="searchBox.OnSearchFieldFocus(true)" 
             onblur="searchBox.OnSearchFieldFocus(false)" 
             onkeyup="searchBox.OnSearchFieldChange(event)"/>
        <a id="MSearchClose" href="javascript:searchBox.CloseResultsWindow()"><img id="MSearchCloseImg" border="0" src="search/close.png" alt=""/></a>
        </div>
      </li>
    </ul>
  </div>
  <div class="tabs">
    <ul>
      <li><a href="annotated.html"><span>Class&nbsp;List</span></a></li>
      <li><a href="hierarchy.html"><span>Class&nbsp;Hierarchy</span></a></li>
      <li><a href="functions.html"><span>Class&nbsp;Members</span></a></li>
    </ul>
  </div>
</div>
<div class="contents">
<h1>isis_base Class Reference</h1><!-- doxytag: class="isis_base" --><div class="dynheader">
Inheritance diagram for isis_base:</div>
<div class="dynsection">
 <div class="center">
  <img src="classisis__base.gif" usemap="#isis_base_map" alt=""/>
  <map id="isis_base_map" name="isis_base_map">
<area href="classbasic__search.html" alt="basic_search" shape="rect" coords="0,56,112,80"/>
<area href="classisis__item.html" alt="isis_item" shape="rect" coords="122,56,234,80"/>
<area href="classrecord__detail.html" alt="record_detail" shape="rect" coords="244,56,356,80"/>
<area href="classrecord__detail__xml.html" alt="record_detail_xml" shape="rect" coords="366,56,478,80"/>
<area href="classterm__search.html" alt="term_search" shape="rect" coords="488,56,600,80"/>
</map>
 </div>
</div>

<p><a href="classisis__base-members.html">List of all members.</a></p>
<table border="0" cellpadding="0" cellspacing="0">
<tr><td colspan="2"><h2>Public Member Functions</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a8f025c70df653ea21e7783a44f6ffab5"></a><!-- doxytag: member="isis_base::isis_base" ref="a8f025c70df653ea21e7783a44f6ffab5" args="($isisdb= '')" -->
&nbsp;</td><td class="memItemRight" valign="bottom"><b>isis_base</b> ($isisdb= '')</td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="af0fa206397855807e3504a4746c6fe72"></a><!-- doxytag: member="isis_base::_auto_set_isis_db" ref="af0fa206397855807e3504a4746c6fe72" args="()" -->
&nbsp;</td><td class="memItemRight" valign="bottom"><b>_auto_set_isis_db</b> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="ae896d924d0f95ed68513e3623892db78"></a><!-- doxytag: member="isis_base::_parse_db_conf" ref="ae896d924d0f95ed68513e3623892db78" args="()" -->
&nbsp;</td><td class="memItemRight" valign="bottom"><b>_parse_db_conf</b> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a08e41417665b1ebb067b40ef2612070c"></a><!-- doxytag: member="isis_base::_is_isis_loaded" ref="a08e41417665b1ebb067b40ef2612070c" args="()" -->
&nbsp;</td><td class="memItemRight" valign="bottom"><b>_is_isis_loaded</b> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a79d7a72e50c792cf544dfc36bd80a148"></a><!-- doxytag: member="isis_base::_isis_conn" ref="a79d7a72e50c792cf544dfc36bd80a148" args="()" -->
&nbsp;</td><td class="memItemRight" valign="bottom"><b>_isis_conn</b> ()</td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a93948501b977cc15c9f45ba561c4bb21"></a><!-- doxytag: member="isis_base::_parse_ccl" ref="a93948501b977cc15c9f45ba561c4bb21" args="($array_result, $mode= 'detail')" -->
&nbsp;</td><td class="memItemRight" valign="bottom"><b>_parse_ccl</b> ($array_result, $mode= 'detail')</td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a1cc9d75f4b32dd1d659bff961cf3d591"></a><!-- doxytag: member="isis_base::get_value_from_mfn" ref="a1cc9d75f4b32dd1d659bff961cf3d591" args="($mfn, $fieldtag)" -->
&nbsp;</td><td class="memItemRight" valign="bottom"><b>get_value_from_mfn</b> ($mfn, $fieldtag)</td></tr>
<tr><td colspan="2"><h2>Public Attributes</h2></td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a9550c4115bfe14a0b7245f67b2718e06"></a><!-- doxytag: member="isis_base::$isis_opt" ref="a9550c4115bfe14a0b7245f67b2718e06" args="" -->
&nbsp;</td><td class="memItemRight" valign="bottom"><b>$isis_opt</b> = '-v error -format aligned -encoding ISO8859_1'</td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a268ac5c77788cda4f60a3e2963529fd0"></a><!-- doxytag: member="isis_base::$isis_db" ref="a268ac5c77788cda4f60a3e2963529fd0" args="" -->
&nbsp;</td><td class="memItemRight" valign="bottom"><b>$isis_db</b> = ''</td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a1e2e90f8c619b2a2fd75613c2c2d9a43"></a><!-- doxytag: member="isis_base::$isis_link" ref="a1e2e90f8c619b2a2fd75613c2c2d9a43" args="" -->
&nbsp;</td><td class="memItemRight" valign="bottom"><b>$isis_link</b> = false</td></tr>
<tr><td class="memItemLeft" align="right" valign="top"><a class="anchor" id="a29f94a24b47580ce65ad5ba21b586b52"></a><!-- doxytag: member="isis_base::$isis_db_conf" ref="a29f94a24b47580ce65ad5ba21b586b52" args="" -->
&nbsp;</td><td class="memItemRight" valign="bottom"><b>$isis_db_conf</b> = array()</td></tr>
</table>
<hr/>The documentation for this class was generated from the following file:<ul>
<li>contrib/igloo/simbio/db/isis/DB_isis_base.inc.php</li>
</ul>
</div>
<!--- window showing the filter options -->
<div id="MSearchSelectWindow"
     onmouseover="return searchBox.OnSearchSelectShow()"
     onmouseout="return searchBox.OnSearchSelectHide()"
     onkeydown="return searchBox.OnSearchSelectKey(event)">
<a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(0)"><span class="SelectionMark">&nbsp;</span>All</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(1)"><span class="SelectionMark">&nbsp;</span>Classes</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(2)"><span class="SelectionMark">&nbsp;</span>Namespaces</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(3)"><span class="SelectionMark">&nbsp;</span>Functions</a><a class="SelectItem" href="javascript:void(0)" onclick="searchBox.OnSelectItem(4)"><span class="SelectionMark">&nbsp;</span>Variables</a></div>

<!-- iframe showing the search results (closed by default) -->
<div id="MSearchResultsWindow">
<iframe src="" frameborder="0" 
        name="MSearchResults" id="MSearchResults">
</iframe>
</div>

<hr size="1"/><address style="text-align: right;"><small>Generated on Tue Mar 30 14:47:14 2010 for IsisReader by&nbsp;
<a href="http://www.doxygen.org/index.html">
<img class="footer" src="doxygen.png" alt="doxygen"/></a> 1.6.1 </small></address>
</body>
</html>